CloudSTRUCTURE: infer population STRUCTURE on the cloud
نویسندگان
چکیده
Summary: We present CloudSTRUCTURE, an application for running parallel analyses with the population genetics program STRUCTURE. The HPC ready application, powered by iPlant cyberinfrastructure, provides a fast (by parallelization) and convenient (through a user friendly GUI) way to calculate likelihood values across multiple values of K (number of genetic groups) and numbers of iterations. The results are automatically summarized for easier determination of the K value that best fit the data. In addition, CloudSTRUCTURE will reformat STRUCTURE output for use in downstream programs, such as TASSEL for association analysis with population structure effects stratified. Availability: https://de.iplantc.org/de/ Contact: [email protected], [email protected]
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تاریخ انتشار 2014